PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR84478.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 352aa MW: 38781.4 Da PI: 9.6102 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 173.7 | 5.4e-54 | 15 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+e+d+yk++Pw+Lp k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++ls+ +++ RWR84478.1 15 LPPGFRFHPTDEELVVHYLKKKASSAPLPV-TIIAEIDLYKFDPWELPGKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILSSgGNQ 112 79****************************.89***************8888999***************************************97778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk Lvfy gr pkg kt+W+mheyrl RWR84478.1 113 KVGVKKALVFYGGRPPKGIKTNWIMHEYRL 142 8***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence |
MESTDSSSGS QQPQLPPGFR FHPTDEELVV HYLKKKASSA PLPVTIIAEI DLYKFDPWEL 60 PGKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPILSSGG NQKVGVKKAL 120 VFYGGRPPKG IKTNWIMHEY RLTDSNSTKP PNSDMASKKN SLRLDDWVLC RIYKKNSSQR 180 PMEREKDDSM DDMLASLPAS MNGQHHPKPP PQKPTNFSAL LGNDENFFEG LLTDDGINSS 240 PMPQLATSST NTKSDLSMAP STGALPMKRT LNSPYWSETV PTGPPPKRYQ SGGNNTDHVT 300 GGGRNSGGNS MATLLNQLPQ GGAAFHQNSL LGSLTDGTFR QQYQLQGLNW NL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15510.1 | 1e-111 | NAC family protein |