PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR84199.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 458aa MW: 51095.2 Da PI: 6.1252

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR84199.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	111.7	8.3e-35	10	137	2	129
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 ppG rF P d l+++yLk+kv+g++++l+ i+++ ++++ P++L++ k+++ e +fF++ ++y++g+rknr+ k g W+ tgkdk++++ k++ RWR84199.1 10 PPGTRFLPCDVVLIMYYLKRKVAGRQFKLKGDIPDIALNNFSPSELREmsYPKTKDLEGFFFCSLGRRYSKGQRKNRSGKGGSWNVTGKDKPIYN-KSR 107 89*************************999**********8422334455588********************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129 +vgl++tL+fy+g+ +g++tdW +heyrle RWR84199.1 108 EVGLRTTLTFYRGKG-RGTRTDWRIHEYRLE 137 9******8776.679********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MANLSKFSPP PGTRFLPCDV VLIMYYLKRK VAGRQFKLKG DIPDIALNNF SPSELREMSY 60 PKTKDLEGFF FCSLGRRYSK GQRKNRSGKG GSWNVTGKDK PIYNKSREVG LRTTLTFYRG 120 KGRGTRTDWR IHEYRLEDKE LPINEFVVLC KIFEKKSRGP KTDEDYESPV EDDADDCVDD 180 DDANGSVVSL LPAIPSSSLA PQEGQNTVAT TSTLDFENRP DAVLPPLPTH TATTIVPRLH 240 LSSPGHVIHK FVLNNVSDED GNTCNGSGSR QVDSVPSKST VEDLDTHGIY KGSEDISDHR 300 KINSNDNSNS IKKLEEEKLW QHHHSPGSID WMEVKDLSNP TEEDWDAYFR WEDLLIPVAA 360 DVSNQGTSFL PAPNATPVLP AHEAMDSSEN IWGHREPTCD SAAYSPLKAG EIVGQYAPQS 420 LARGKQLHLH LGLECISKER WFLTNVQFHL GSIVACPA

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MANLSKFSPP PGTRFLPCDV VLIMYYLKRK VAGRQFKLKG DIPDIALNNF SPSELREMSY  60
PKTKDLEGFF FCSLGRRYSK GQRKNRSGKG GSWNVTGKDK PIYNKSREVG LRTTLTFYRG  120
KGRGTRTDWR IHEYRLEDKE LPINEFVVLC KIFEKKSRGP KTDEDYESPV EDDADDCVDD  180
DDANGSVVSL LPAIPSSSLA PQEGQNTVAT TSTLDFENRP DAVLPPLPTH TATTIVPRLH  240
LSSPGHVIHK FVLNNVSDED GNTCNGSGSR QVDSVPSKST VEDLDTHGIY KGSEDISDHR  300
KINSNDNSNS IKKLEEEKLW QHHHSPGSID WMEVKDLSNP TEEDWDAYFR WEDLLIPVAA  360
DVSNQGTSFL PAPNATPVLP AHEAMDSSEN IWGHREPTCD SAAYSPLKAG EIVGQYAPQS  420
LARGKQLHLH LGLECISKER WFLTNVQFHL GSIVACPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-36	NAC family protein