PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR84023.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 399aa MW: 45342.1 Da PI: 7.1373

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR84023.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.2	2.7e-52	14	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 + pGfrFhPtdeelv +yLk+k+++k+l++ e ik++diyk++PwdLp + ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ + RWR84023.1 14 MLPGFRFHPTDEELVGFYLKRKIQQKPLSI-ELIKQLDIYKFDPWDLPkELATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSeGA 111 579*************************.89***********445566889**********************************9555 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + +glkk+Lvfy+gra kg ktdW+mhe+rl RWR84023.1 112 KCIGLKKSLVFYRGRAAKGIKTDWMMHEFRL 142 66*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MDERNDFDKV DEVMLPGFRF HPTDEELVGF YLKRKIQQKP LSIELIKQLD IYKFDPWDLP 60 KELATTGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG AKCIGLKKSL 120 VFYRGRAAKG IKTDWMMHEF RLPSVPDSTP NRRPTDKSFP ANDSWAICRI FKKTNSMAQR 180 ALSHSWVSPM PENTCSDILA HAGRVIQFSE NNSCTTEAGS AIQFSCNNDL QQPPANFSPL 240 NIPSYRPNNP TLYKPASISI SNMEFPAGFM FSPLEMLMPE KSNTDVASML PNLPPVVFGD 300 VGKDPTGTYF GSQQQYNGLS INSPQEMHEN MHIIEDDTSI SKNTDVSHMN NQWGPVRSFN 360 FPFNLPPNLT DTWKTNSPWD SPPSPSEMST SYSTNKCYT

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MDERNDFDKV DEVMLPGFRF HPTDEELVGF YLKRKIQQKP LSIELIKQLD IYKFDPWDLP  60
KELATTGEKE WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSEG AKCIGLKKSL  120
VFYRGRAAKG IKTDWMMHEF RLPSVPDSTP NRRPTDKSFP ANDSWAICRI FKKTNSMAQR  180
ALSHSWVSPM PENTCSDILA HAGRVIQFSE NNSCTTEAGS AIQFSCNNDL QQPPANFSPL  240
NIPSYRPNNP TLYKPASISI SNMEFPAGFM FSPLEMLMPE KSNTDVASML PNLPPVVFGD  300
VGKDPTGTYF GSQQQYNGLS INSPQEMHEN MHIIEDDTSI SKNTDVSHMN NQWGPVRSFN  360
FPFNLPPNLT DTWKTNSPWD SPPSPSEMST SYSTNKCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-103	NAC family protein