PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR83980.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 294aa    MW: 33672.5 Da    PI: 6.6804
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR83980.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.18.8e-50101381129
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                 lppGfrF P+deelv++yL k+++++  +l e++ e+d++++ePw+Lp ++  + +ewyfFs rd+kyatg r+nr+tksgyWkatgkd++v++  +++
  RWR83980.1  10 LPPGFRFYPRDEELVCHYLYKRIANELQPL-ETMVEIDLHTCEPWQLPDEAMLGANEWYFFSFRDHKYATGVRANRMTKSGYWKATGKDRPVFDPtTHK 107
                 79***********************99999.88***************76677899**************************************96777 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrle 129
                  vg++ktLvfy +rap+g+kt Wvmhe+rle
  RWR83980.1 108 IVGMRKTLVFYLERAPNGKKTGWVMHEFRLE 138
                 8***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MGLRDVEATL PPGFRFYPRD EELVCHYLYK RIANELQPLE TMVEIDLHTC EPWQLPDEAM  60
LGANEWYFFS FRDHKYATGV RANRMTKSGY WKATGKDRPV FDPTTHKIVG MRKTLVFYLE  120
RAPNGKKTGW VMHEFRLESL HMPPKEDWVL CRVFHRRNKD LPAKSGLEVE QEKIGSSSIQ  180
ADSSPPPTHQ TMASNKQMFS FSNILQEANN PPSTMLNLAL LHNFLKFPQK MDDAPMTGMN  240
TRGGDEYGFL LDLGLEHQIL EYGESPTLET KSFLDKGEGA SLALRPFGVP LPYV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.13e-76NAC family protein