PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR83765.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ARR-B | ||||||||
Protein Properties | Length: 585aa MW: 66037 Da PI: 5.123 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 80.1 | 2.6e-25 | 194 | 247 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+++ G +k Pk+il+lm+++gLt+e+v+SHLQkYRl RWR83765.1 194 KARVVWSVDLHQKFVNAVNHI-GFDKVGPKKILDLMNIPGLTRENVASHLQKYRL 247 68*******************.9*******************************8 PP | |||||||
2 | Myb_DNA-binding | 37.9 | 4.2e-12 | 196 | 246 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+ G + +k+I m+ g+t++++ s++qky+ RWR83765.1 196 RVVWSVDLHQKFVNAVNHIGFDkvGPKKILDLMNiPGLTRENVASHLQKYR 246 678***********************************************7 PP | |||||||
3 | Response_reg | 81.7 | 2.3e-27 | 10 | 118 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ ++l+++l+k y ev+++ ++++al++l+e++ +D+++ D+ mp+mdG++ll++ e +lp+i+++ ge + + + ++ Ga RWR83765.1 10 VLVVDDDPTWIKILEKMLKKCSY-EVTTCCKATDALNMLRERKdrFDIVISDVYMPDMDGFKLLEQVGLEM-DLPVIMMSVDGETSRVMKGVQHGAC 104 89*********************.***************888778**********************6644.8************************ PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ ++el++ RWR83765.1 105 DYLLKPIRMKELRN 118 ***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 585 aa Download sequence |
MDGFPAGLRV LVVDDDPTWI KILEKMLKKC SYEVTTCCKA TDALNMLRER KDRFDIVISD 60 VYMPDMDGFK LLEQVGLEMD LPVIMMSVDG ETSRVMKGVQ HGACDYLLKP IRMKELRNIW 120 QHVYRKKINE VKEIESQDHE SNEGTQITRR GLNDFEYDLL LCGSDLNSTK KRKELGNEEH 180 GDQDFSNNAS ALKKARVVWS VDLHQKFVNA VNHIGFDKVG PKKILDLMNI PGLTRENVAS 240 HLQKYRLYLS RLQRQSESNT AFCGIKQSDF SSKDHPGKFG LQSSTITQHN SPNSFGYSSK 300 ISIVQDAVPE IPEDELKNMV SFLPITDAKN SIKDDVPVAQ KFNTVPQQGV VLPFGGMVSD 360 DCTSFESTRS QQQSWSEESP VVQLMHHLKQ DHELHLPLKG CPHPPLHGQQ HHFQVDPVQT 420 AASANSRTGS SQKAGHSEIN PLYAENENNH VRISSPIACG IDTFPSQLEQ NIVNQQRFGE 480 IPVSSATSST KNQDLDRNCT NNWEYSQSLT SKSRSSSISS EDNLPLISLQ SYGSFEDVPL 540 DNVDLFYLSD SSTITDLQSY VYDGLRFDYD DQCDSMEYPI TEDMF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 1e-116 | ARR-B family protein |