PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR83168.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 396aa MW: 43779.5 Da PI: 8.2065

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR83168.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.4	2.4e-31	253	308	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a+++LGGs+ AtPk+i+elmkv+gLt+++vkSHLQkYRl+ RWR83168.1 253 KQRRCWSPELHKRFLSALNELGGSQAATPKQIRELMKVDGLTNDEVKSHLQKYRLH 308 79****************************************************97 PP
2	Myb_DNA-binding	41.8	2.5e-13	255	306	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++++++ a ++lGg t+k I + m g+t ++ks++qky+ RWR83168.1 255 RRCWSPELHKRFLSALNELGGSqaaTPKQIRELMKvDGLTNDEVKSHLQKYR 306 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MGSYSELSLD LNPCYISKMI SGFTREVSVI KDPSEKLLKV QDILKSLEEE RKKIEAFKRE 60 LPFCMVLVIE AIEAVKEEEK KCRSLAEKAR PVLEEFMMPV NSKLDGGRGV ESEKDNRDKM 120 NWMSSVQLWS DTDGNSNKNK LVGDLKEKPE EQKQSALENS FILCKNKSNG GAFTPFKGFS 180 GFPAKKEEKE VLPRTEISLL SPIIKNPNAD SGIGSSNLKS GIEATAFASS SVAATMNIQS 240 NSQQQQHMQI PRKQRRCWSP ELHKRFLSAL NELGGSQAAT PKQIRELMKV DGLTNDEVKS 300 HLQKYRLHTR RLPSSAPATA NQDVLVMGGM RGLWVPNVHY QVSKQSTSQG SPQGPLQLSG 360 TSRAVSTTGG DSGEDEDGKS ESNSWKSHLG SGEETE

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MGSYSELSLD LNPCYISKMI SGFTREVSVI KDPSEKLLKV QDILKSLEEE RKKIEAFKRE  60
LPFCMVLVIE AIEAVKEEEK KCRSLAEKAR PVLEEFMMPV NSKLDGGRGV ESEKDNRDKM  120
NWMSSVQLWS DTDGNSNKNK LVGDLKEKPE EQKQSALENS FILCKNKSNG GAFTPFKGFS  180
GFPAKKEEKE VLPRTEISLL SPIIKNPNAD SGIGSSNLKS GIEATAFASS SVAATMNIQS  240
NSQQQQHMQI PRKQRRCWSP ELHKRFLSAL NELGGSQAAT PKQIRELMKV DGLTNDEVKS  300
HLQKYRLHTR RLPSSAPATA NQDVLVMGGM RGLWVPNVHY QVSKQSTSQG SPQGPLQLSG  360
TSRAVSTTGG DSGEDEDGKS ESNSWKSHLG SGEETE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	4e-58	G2-like family protein