PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR82999.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 302aa    MW: 33409.8 Da    PI: 8.7031
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR82999.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.41.1e-31228286259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D+++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp++++itYeg+Hnh+
  RWR82999.1 228 SDEFSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPSMLIITYEGDHNHT 286
                 69*************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MEVELITADM SDGCSPKMEE TGVQEAASEE LQSMETLITM LSLQQQKYHT PPMKTEEAEV  60
ELNKAISHLG HTRTGHARFR RAPLPSLQQN TDNCNGHKTI VNQKNSDFSP WVYCPTPIQR  120
LPPSISPHHH HHLNGISMNG GTELAERTTS SPLPATNSFL ISSLTGDTDT KLASSSSLKR  180
KCCWKSGDGS DKCGTVSGRC HCSKRRRLKV KRVVRVPAIS SKMADIPSDE FSWRKYGQKP  240
IKGSPHPRGY YKCSSVRGCP ARKHVERALD DPSMLIITYE GDHNHTNLSI SHSSPALVLE  300
SS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1204208KRRRL
2207216RLKVKRVVRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.13e-69WRKY family protein