PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR82871.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 328aa MW: 37500.8 Da PI: 7.9647 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 169.4 | 1.1e-52 | 17 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeel+++yL+ kv +++++ i+evd+ ++ePw+Lp +k +e+ewyfFs rd+ky++g r+nrat +gyWk tgkd++v+++ +g+ RWR82871.1 17 LPPGFRFHPTDEELITFYLASKVFNRSFSS-VEIAEVDLKRWEPWELPDVAKMGEREWYFFSLRDRKYPSGMRTNRATIAGYWKGTGKDRKVYNAsNGA 114 79*************************998.45***************8888899**************************************987899 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 l+g+kktLvfy+grap+gekt+Wvmheyrl RWR82871.1 115 LIGMKKTLVFYRGRAPRGEKTKWVMHEYRL 144 9***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MLALEEVVWE DTNEHGLPPG FRFHPTDEEL ITFYLASKVF NRSFSSVEIA EVDLKRWEPW 60 ELPDVAKMGE REWYFFSLRD RKYPSGMRTN RATIAGYWKG TGKDRKVYNA SNGALIGMKK 120 TLVFYRGRAP RGEKTKWVMH EYRLDGHLSY LQASKDEWVI CRIFYKTGGE KKNPCIKSSS 180 SYFLEASPPP TIYLPPLLDP STLHSPRQTL SNPHMVLQES NPSSQNSLHY PTTLQPFPSP 240 TNPSILKSLS HQFLLKEPLI PKQCKMGNSM FSISNWVDID HQLLQNHCTH DKCLGAFGLS 300 AAGVAHDMSP SISFDMTGFQ MVDHPEPW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76420.1 | 5e-90 | NAC family protein |