PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR82718.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 423aa MW: 48094.6 Da PI: 6.869

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR82718.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	114.9	8.6e-36	45	187	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........sgyW 83 lp+G++F+Ptd+el+ e+L++kve+++ ++++ i+ +i++++P++Lp v+++ + +fF++ +k+y+tg+rk+r+++ + +W RWR82718.1 45 LPAGVKFDPTDQELI-EHLEAKVESEQskshplIDEFIPtIEGEdGICYTHPEKLP-GVTKDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqggETRW 141 799**********.99***996665443333333666646******.555667799***************73334555544778 PP NAM 84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++tgk+++vl+ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l RWR82718.1 142 HKTGKTRPVLV-NGKQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 187 *********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MNYSTGSKSS SDLIDAKLEE HRMCESKQCP SCGHKLERKP DWLGLPAGVK FDPTDQELIE 60 HLEAKVESEQ SKSHPLIDEF IPTIEGEDGI CYTHPEKLPG VTKDGLSRHF FHRPSKAYTT 120 GTRKRRKIQT ECDLQGGETR WHKTGKTRPV LVNGKQKGCK KILVLYTNFG KHRKPEKTNW 180 VMHQYHLGQL EEEKEGELVV SKIFYQTQPR QCNLSDRSAS GEGSDHRRES GGGSCSSKEV 240 SHREELSGAG ISAYTAMDIQ PMKCDNFSFT PFRKSFDEVG VREASKAREE SGRTCEEHEE 300 HEHQRPQHHM TPDQPQQPIS TASYPVSRPS NPISNIISPP LHHNSIFLDD PYQVPRMILQ 360 SQKFQQQHQH QKLAGRSASG LEELIMGCTS NDMKEESSMA NPQEAEWLKY SYWPDPDNPD 420 HHG

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MNYSTGSKSS SDLIDAKLEE HRMCESKQCP SCGHKLERKP DWLGLPAGVK FDPTDQELIE  60
HLEAKVESEQ SKSHPLIDEF IPTIEGEDGI CYTHPEKLPG VTKDGLSRHF FHRPSKAYTT  120
GTRKRRKIQT ECDLQGGETR WHKTGKTRPV LVNGKQKGCK KILVLYTNFG KHRKPEKTNW  180
VMHQYHLGQL EEEKEGELVV SKIFYQTQPR QCNLSDRSAS GEGSDHRRES GGGSCSSKEV  240
SHREELSGAG ISAYTAMDIQ PMKCDNFSFT PFRKSFDEVG VREASKAREE SGRTCEEHEE  300
HEHQRPQHHM TPDQPQQPIS TASYPVSRPS NPISNIISPP LHHNSIFLDD PYQVPRMILQ  360
SQKFQQQHQH QKLAGRSASG LEELIMGCTS NDMKEESSMA NPQEAEWLKY SYWPDPDNPD  420
HHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-125	NAC family protein