PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR82681.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Trihelix

Protein Properties

Length: 284aa MW: 31981.3 Da PI: 8.8717

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR82681.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	46.9	7.3e-15	47	117	2	74
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtse 74 Wt +e l+L++ + ++e + ++ + ++W+ +s+++++ g+ rs++ C+ kwe + +ykkik++e++ + RWR82681.1 47 WTIEEMLVLVNEVATINEGSLKTLSTYQRWKMISDNCMALGVVRSSNLCRRKWETMLAEYKKIKDWESQS--G 117 *******************************************************************984..3 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MEAGESTPQV EKTSQTPVAK KNGRHSVTKP KTSLPTRFTR SQVVPDWTIE EMLVLVNEVA 60 TINEGSLKTL STYQRWKMIS DNCMALGVVR SSNLCRRKWE TMLAEYKKIK DWESQSGAGS 120 YWCLESERKK EYGLPAFFDR ELFGSIYGFL KAQETQPDSD MDSESEGLIR KMKTALHDVT 180 MDLGPNSSTR SKACKSRAVK AQEIVRKLQE SSELMHAILR GELSETAGGN GTHSSTDVNE 240 PNHQTKFVRR QGDELIKVFG TLVVNLNQFV ELVKENGLSL KRNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	1e-38	Trihelix family protein