PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR82574.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 505aa MW: 54316.2 Da PI: 7.6744

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR82574.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	77.9	1.1e-24	123	179	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 D ynWrKYG K+vkg e++rsYYrC++a+C vkk+v r+ ++v+ei+Y+g+Hnh+ RWR82574.1 123 ADCYNWRKYGEKQVKGIECSRSYYRCSHADCDVKKNVVRCY-SGHVIEIMYKGRHNHD 179 699************************************.9************7 PP
2	WRKY	102.9	1.8e-32	325	382	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vkg+++prsYY+Ct+ +Cpv+++ver+++d k+++itYeg+Hnhe RWR82574.1 325 SDGYKWRKYGQKIVKGNPNPRSYYKCTYDECPVRRHVERASDDAKTLVITYEGKHNHE 382 7********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MAENQSSKPS SSSSSSSGCV CSLLALARAK DPANSSPSGS EVANSPATTL SGDSLSGSQG 60 QFVMSHQEAL ASVMAEAQMK LQAVHPSSSP KLPQNSPVPA VLSAFKPILQ QQRPEPVLEE 120 TPADCYNWRK YGEKQVKGIE CSRSYYRCSH ADCDVKKNVV RCYSGHVIEI MYKGRHNHDP 180 PQKNKYTKES SVPCSDLFGE SESANLPVET TNRSNSPAPR RDQSAALATS EQQLHYPINC 240 DGGAGIRVKY DDGREPKRRP GCPCRHCSAP GASGGDRSGS SKRTDRVESA GYHLTWMVTY 300 LTPLLKTTGE SKVVLQTASD LGTFSDGYKW RKYGQKIVKG NPNPRSYYKC TYDECPVRRH 360 VERASDDAKT LVITYEGKHN HEPPGSKKED PKVPVETAEG KQNHESSASE KGAAKAHAIT 420 HEGKENPGLP ASENSNVSQG TALLIAAAVA AAAEGQLTKS NHVQIQESTA QVPSDREDEV 480 SEKSLDLGGD KALESAQTLL SIGST

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MAENQSSKPS SSSSSSSGCV CSLLALARAK DPANSSPSGS EVANSPATTL SGDSLSGSQG  60
QFVMSHQEAL ASVMAEAQMK LQAVHPSSSP KLPQNSPVPA VLSAFKPILQ QQRPEPVLEE  120
TPADCYNWRK YGEKQVKGIE CSRSYYRCSH ADCDVKKNVV RCYSGHVIEI MYKGRHNHDP  180
PQKNKYTKES SVPCSDLFGE SESANLPVET TNRSNSPAPR RDQSAALATS EQQLHYPINC  240
DGGAGIRVKY DDGREPKRRP GCPCRHCSAP GASGGDRSGS SKRTDRVESA GYHLTWMVTY  300
LTPLLKTTGE SKVVLQTASD LGTFSDGYKW RKYGQKIVKG NPNPRSYYKC TYDECPVRRH  360
VERASDDAKT LVITYEGKHN HEPPGSKKED PKVPVETAEG KQNHESSASE KGAAKAHAIT  420
HEGKENPGLP ASENSNVSQG TALLIAAAVA AAAEGQLTKS NHVQIQESTA QVPSDREDEV  480
SEKSLDLGGD KALESAQTLL SIGST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.2	4e-60	WRKY family protein