PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR82405.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 86aa    MW: 9760.81 Da    PI: 9.7136
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR82405.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.52e-101256345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WT+   +l+ +a +++ ++   +W  +ar +g g++++++k ++ 
       RWR82405.1 12 SWTPKQNKLFEEALARYDKDtpdRWQNVARAVG-GKSAEEVKRHYE 56
                     7********************************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    
MASSSMRSSN SSWTPKQNKL FEEALARYDK DTPDRWQNVA RAVGGKSAEE VKRHYELLVE  60
DLKYIESGQV PYPNYKSSGG RNSKGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.11e-36MYB_related family protein