PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR82184.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | WRKY | ||||||||
Protein Properties | Length: 170aa MW: 18716.1 Da PI: 9.2069 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 72 | 8.3e-23 | 80 | 137 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDg++W+KYGqK +++ + r Y++C a+C +kkkve +dp+ +++tYeg+H+h+ RWR82184.1 80 DDGHTWKKYGQKFITSIQKIRCYFKCQKANCIAKKKVEWPPSDPSNLIVTYEGHHDHP 137 8********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MYSCLEGPSP RHKVSLLPYT ADKKRKAHLP LFLPSLCLAA AAAAAARQRT TTMATAPPTQ 60 TLIEEQANDT EGGRNQQIPD DGHTWKKYGQ KFITSIQKIR CYFKCQKANC IAKKKVEWPP 120 SDPSNLIVTY EGHHDHPSNS GPRSSSSQQD GSDPSVNDYN LLSQVLGGHK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49520.1 | 5e-14 | WRKY family protein |