PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR82127.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YA
Protein Properties Length: 311aa    MW: 33495.4 Da    PI: 10.01
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR82127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA100.31.8e-31146200358
   CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 + YVNaKQy++Il+RR++Rak+e ++kl +ksrkpylheSRh hA+rRpRg+gGrF
  RWR82127.1 146 TTYVNAKQYHGILRRRKSRAKAEMKNKL-IKSRKPYLHESRHLHAMRRPRGCGGRF 200
                 78**************************.**************************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MQAMCFKGHG GLLQHASVQS STVQIAPWWS VFGSPRIFGE LCGQLKPSSD DQPNGEDKTT  60
ATQVKYATHH GTIMAFQEKG SSDTSKFSLV SGQSEDSRKE NKAQQLSTTI SLQPSPPEHQ  120
AHFGLGFGQH MHGQVLLPLN VAEDGTTYVN AKQYHGILRR RKSRAKAEMK NKLIKSRKPY  180
LHESRHLHAM RRPRGCGGRF LNTKNGNIGK GGSTVDKESG KGAQAASSSS SEILQSDSGN  240
SNSGKVTCGG PSLSGSEVTS IYPQADTDCF RTENLRSSGF HHFTNMTPVG LSSGSTIKWA  300
TSDGCSNLLR G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.22e-34NF-YA family protein