PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR82107.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 299aa MW: 34284.4 Da PI: 7.3245

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR82107.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.4	6.8e-54	7	135	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eelv +yL+kk++ +k++l +i+++d+y++ePwdL+ + ++e+kewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+v+s k RWR82107.1 7 VPPGFRFHPTEEELVGYYLTKKLACEKIDL-GIITDIDLYRIEPWDLQdRcsLGYEEQKEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVHS-K 103 69**************************.99**********943443334778**********************************.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g++ktLvfykgrap+g+ktdW+mheyrl RWR82107.1 104 RRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRL 135 999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MEMESCVPPG FRFHPTEEEL VGYYLTKKLA CEKIDLGIIT DIDLYRIEPW DLQDRCSLGY 60 EEQKEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAV HSKRRIIGMR KTLVFYKGRA 120 PNGRKTDWIM HEYRLQTCED APPQAKGWVV CRAFKKPSPN PRRGIDPWNS PYHELQAWPE 180 SSHPQFANTH HMGNLTQCAF SYNHEENEES KQAHLNQILK LPKLDSPSLS TSLATTNDDQ 240 RDNYSAQFVD WNAIDKLLAS QLTQPASFSN SNLAIIPPNT EVDALNQGNH FLGSFGESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71930.1	1e-91	NAC family protein