PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81982.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YC
Protein Properties Length: 335aa    MW: 38528.9 Da    PI: 4.5832
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81982.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC123.21e-3852149296
       NF-YC   2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 
                 l+ fw +q   +e+ +dfk+helP+arik+i+k++++vkm+sa+aPvllska elfi+elt  swlhaee +rrt+++sd+ +a+ + ++f fl ++ 
  RWR81982.1  52 LQLFWRQQmteVERIQDFKHHELPFARIKRIMKSNPEVKMVSADAPVLLSKASELFIMELTQISWLHAEEEQRRTVRRSDLGDAIRHKETFHFLEEMK 149
                 899****976678999******************************************************************************8765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MTSKADTHPG GSTRREVVPF LSQESFLGMP SQLAGETANP YLTSSELKRQ RLQLFWRQQM  60
TEVERIQDFK HHELPFARIK RIMKSNPEVK MVSADAPVLL SKASELFIME LTQISWLHAE  120
EEQRRTVRRS DLGDAIRHKE TFHFLEEMKE EEIDGNWLRT ESLPNDGMEF PLMPANSIDQ  180
ALGEDFMSRP QEIFQQSMIQ QPPMSTLNPI TLPELPQDFM SRSKEIFLQS MIQQPLMSTL  240
TPTTVYEPTQ EIFQQAMQAT VYEPLQEIFQ QPMQQPLMST LTPAIVYEPA REIFQQSMIQ  300
QPLMSTMTPA TAYELPQPYA GSMPPDQIGQ GSDRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63470.27e-35NF-YC family protein