PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81981.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family G2-like
Protein Properties Length: 165aa    MW: 18460.7 Da    PI: 6.8887
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81981.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like72.75.2e-23109159152
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 
                 kpr+ W + LH++F++av+++ G+++A+Pk+ilelm+v+gLt+e+v+SHLQ 
  RWR81981.1 109 KPRITWHSSLHAQFLNAVDKI-GIDRAVPKKILELMDVPGLTRENVASHLQE 159
                 79*******************.*****************************5 PP
2Myb_DNA-binding24.75.5e-08113158345
                      SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 
                       W   ++ ++++av + G +   +k+I + m   g+t++++ s++q
       RWR81981.1 113 TWHSSLHAQFLNAVDKIGIDraVPKKILELMDvPGLTRENVASHLQ 158
                      6********************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MSADCDVNVA KRGLEHGACY YLMKPVSLGE IRNIWQHLIR KKIEEKKMGQ IGSSEKVEED  60
TTGKKSSEDG ESASTVNEGN SKKQHKRQKE AKEDGNGSDD EEENTTQRKP RITWHSSLHA  120
QFLNAVDKIG IDRAVPKKIL ELMDVPGLTR ENVASHLQES HIAVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.19e-39ARR-B family protein