PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81969.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 352aa MW: 38852.3 Da PI: 8.051

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.2	1.9e-33	31	85	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLH+rFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl RWR81969.1 31 KPRLRWTVELHDRFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 85 79****************************************************8 PP
2	Myb_DNA-binding	70.9	2.1e-22	33	84	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e+++++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ RWR81969.1 33 RLRWTVELHDRFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 84 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MFHPKKPTMN SHDRPMCVQG DSGLVLTTDP KPRLRWTVEL HDRFVDAVTQ LGGPDKATPK 60 TIMRVMGVKG LTLYHLKSHL QKFRLGKQPH KEFNEHSARD AMALEMQRNA ASSSALMGRS 120 INDRNEHINE AMRMQMEVQR RLHEQLEVQK HLQLRIEAQG KYMQTILEKA CQTLAGENMA 180 SGNYKGVGDP AVIDMGGSPI NFPSLQDLHL YAGEPQLSMM QQPMDRSSLD GMLPMNDTIS 240 LGSKRTSPYS CSGKSPLIWA DDLRLQELGS ATACLSSQED AFKGDHLHNA SSTIDGGVDM 300 DGLGADGGGE KKFEASAKLE RPSPRRAPPP VERMNSMMMG GAIPPSRNMS YG

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MFHPKKPTMN SHDRPMCVQG DSGLVLTTDP KPRLRWTVEL HDRFVDAVTQ LGGPDKATPK  60
TIMRVMGVKG LTLYHLKSHL QKFRLGKQPH KEFNEHSARD AMALEMQRNA ASSSALMGRS  120
INDRNEHINE AMRMQMEVQR RLHEQLEVQK HLQLRIEAQG KYMQTILEKA CQTLAGENMA  180
SGNYKGVGDP AVIDMGGSPI NFPSLQDLHL YAGEPQLSMM QQPMDRSSLD GMLPMNDTIS  240
LGSKRTSPYS CSGKSPLIWA DDLRLQELGS ATACLSSQED AFKGDHLHNA SSTIDGGVDM  300
DGLGADGGGE KKFEASAKLE RPSPRRAPPP VERMNSMMMG GAIPPSRNMS YG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-101	G2-like family protein