PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR81948.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 219aa MW: 25443 Da PI: 9.4196 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.5 | 7.2e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nrqvtfskRr g+lKKA+EL vLCda+ viifss+gk++eyss RWR81948.1 9 KRIENATNRQVTFSKRRGGLLKKAHELAVLCDAQLGVIIFSSSGKMFEYSS 59 79***********************************************96 PP | |||||||
2 | K-box | 74.6 | 2.8e-25 | 71 | 160 | 1 | 90 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqee 90 yqk sg++ +e + ++ + e++++k+e+++Lq + Rhl GedL +L++ +L+qLeqqLe s++++Rs+Kn ll +q+e+l++k e+q + RWR81948.1 71 YQKVSGTHIQEYDDQQVYCEMTRMKNENDKLQASMRHLTGEDLATLTMGDLHQLEQQLEMSVNRVRSRKNLLLQQQLENLRRKLAEHQAA 160 799999999999***********************************************************************9998876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MGRGKIEIKR IENATNRQVT FSKRRGGLLK KAHELAVLCD AQLGVIIFSS SGKMFEYSSP 60 QSSMRHIIDR YQKVSGTHIQ EYDDQQVYCE MTRMKNENDK LQASMRHLTG EDLATLTMGD 120 LHQLEQQLEM SVNRVRSRKN LLLQQQLENL RRKLAEHQAA MEQKVVDQPL LEHFGGAFYQ 180 DEQARNMLQL SPQLHPFRLQ PTQPNLQDAS IQRHGFQLW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 3e-47 | MIKC_MADS family protein |