PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81923.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 303aa    MW: 34701.9 Da    PI: 8.4084
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1614.7e-50251551128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                 l pGfrFhPtdeelv +yL++kv++ +l++ e+ik++diyk++PwdLpk+v++ ++kewyfF+ r +ky+++ r+nr+t sg+Wkatg d+++++ +++
  RWR81923.1  25 LLPGFRFHPTDEELVGFYLQRKVQKIPLSI-EIIKQIDIYKYDPWDLPKEVSTvGDKEWYFFCLRGRKYKNSIRPNRVTGSGFWKATGIDRSIYADGER 122
                 579***************************.89***************655444999**************************************8433 PP

         NAM  99 l...vglkktLvfykgrapkgektdWvmheyrl 128
                 +   +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  RWR81923.1 123 AndcIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 155
                 3556***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MGREPEDPMD MEKRSAQNKS DEDVLLPGFR FHPTDEELVG FYLQRKVQKI PLSIEIIKQI  60
DIYKYDPWDL PKEVSTVGDK EWYFFCLRGR KYKNSIRPNR VTGSGFWKAT GIDRSIYADG  120
ERANDCIGLK KSLVYYRGSA GKGTKTDWMM HEFRLPPSTN GSSNLTNAKN NQEAEVWTIC  180
RIFKRTAAYR KYTPGWSDSS PIKRHPTHAN SKSCSFESDD GEKYQYFGTS SIQQTEKKPS  240
ITVNEDKQLL SDQYNPVAQA PKTALCSSFP STNSNEFLRQ GSWDELGAIV EVALDPLVYG  300
YRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.13e-87NAC family protein