PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR81837.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NF-YA | ||||||||
Protein Properties | Length: 203aa MW: 22533.9 Da PI: 7.9329 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 108.3 | 6.1e-34 | 109 | 165 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak+e e+kl +ksrkpylheSRh hAl+RpRg+gGrF RWR81837.1 109 EEPVYVNAKQYHGILRRRQSRAKAELENKL-IKSRKPYLHESRHLHALKRPRGCGGRF 165 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MTSSVHDLSS EPDNGGSREQ QKQTQNLQPQ IQNQPPTTGL VHPGTASASA EYMMPHPQLD 60 VGHTMAQTPY AYHDPYYGGI LAAYGAQTMI HPHFGIQPTG VPLPSDAIEE PVYVNAKQYH 120 GILRRRQSRA KAELENKLIK SRKPYLHESR HLHALKRPRG CGGRFVNSKG DQNQNEVSTH 180 DKSQQPDHDP DRNDSSEKAS LSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 9e-49 | NF-YA family protein |