PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81774.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

DBB

Protein Properties

Length: 269aa MW: 29958.2 Da PI: 7.37

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81774.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.4	2.5e-07	4	35	5	36
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg 36 C+ ++++e++ fC ++ lC+ C + H+ RWR81774.1 4 QCDVCNREEASVFCSADEAALCDGCDGKVHHA 35 7*************************999643 PP
2	zf-B_box	27.2	7.9e-09	54	88	2	36
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg 36 + + C+ +++ ++ fC++++ lC++C l++H + RWR81774.1 54 QSPLCDICQKRRAFVFCREDRAILCRECDLSIHTS 88 6789*****************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MKIQCDVCNR EEASVFCSAD EAALCDGCDG KVHHANQLAS KHPRFSLLRP SYKQSPLCDI 60 CQKRRAFVFC REDRAILCRE CDLSIHTSNR LTQKHIRFLL TGFKLSPMSS TSAAAADSSK 120 QVMEKKKKKT VFDEMGSSLP EEKSEDLCMS SISEYLIKTL PGWHVEELLG SSPPADGLCE 180 RDDLMTFSKK DQLDGHLSIV SEDFGTWGPH VPQIQGPCFP PGVLGSQNGV GLKDFKETGN 240 VRVVLRSSDD GFTVPQMSPP YKRSRPLWQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	2e-62	DBB family protein