PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR81769.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 236aa MW: 27013.4 Da PI: 8.6919 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.7 | 6.4e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nrqvt+skRr gilKKA EL vLCdaev++i+fsstgk+ ey+s RWR81769.1 9 KRIENPTNRQVTYSKRRGGILKKARELTVLCDAEVSLIMFSSTGKFSEYCS 59 79***********************************************96 PP | |||||||
2 | K-box | 99.5 | 4.9e-33 | 71 | 168 | 1 | 98 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 yq+ sg +l+++++e++q++l+kLk+ ++nL+re+R+++GedL++L++ eL+ Leq+L++slk +R++K++++++q+e+ +kk k+l+e++++L + l RWR81769.1 71 YQQVSGINLWNSHYEKMQNHLNKLKDDNNNLRREIRQRMGEDLNDLEIDELRGLEQNLDNSLKIVRDRKYHVITTQTETYKKKLKSLHETHTDLVRAL 168 7899999***************************************************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MGRGKIEIKR IENPTNRQVT YSKRRGGILK KARELTVLCD AEVSLIMFSS TGKFSEYCSP 60 TTTTKKVFDR YQQVSGINLW NSHYEKMQNH LNKLKDDNNN LRREIRQRMG EDLNDLEIDE 120 LRGLEQNLDN SLKIVRDRKY HVITTQTETY KKKLKSLHET HTDLVRALDG KDDNGNCALV 180 DNGGPDYETA LGWANGGSQM FAFCIQPCQP NLQETRYGSH DLRLGSSSTV TQLQPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 3e-68 | MIKC_MADS family protein |