PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81609.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GRAS
Protein Properties Length: 822aa    MW: 92318.7 Da    PI: 4.9519
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81609.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS395.36.3e-1214458161374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA+av+++d +  ++lL+++++++sp+gd  qRla yf+e+L+arla+++s++y   + ++t     ++ l+a++lf  ++P+ ++s++ aN
  RWR81609.1 445 LRNLLIQCAQAVAANDWRTGSELLKQIRQHSSPSGDGSQRLAYYFAEGLEARLAGTGSQIYFERAIKRT----AADILKAYHLFLAACPFKRVSYFFAN 539
                 689****************************************************99999976666666....59************************ PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 q+Il+ ve+++r+Hi+Df+i++G+QWp+Llq L  R++gpp++R+Tg++ p+sg   ++++eetg+rLa++A++++++fe+  ++++++e++++e+L++
  RWR81609.1 540 QTILDTVENATRLHIVDFGINYGFQWPCLLQRLGGRSGGPPKVRMTGIDLPQSGfrPAKRVEETGRRLADYAQTFNIRFEYVSIACSKWETIQVEDLKI 638
                 *****************************************************9********************************************* PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +++E+l+Vn+++q hrl de+v+les+rd vLk++++++P+++++   + ++ns+ F +rf eal + salfd++e+++pre  er+ +Er l+gre++
  RWR81609.1 639 EKDEVLVVNCSYQFHRLADETVTLESPRDLVLKTIRKMNPDIFIHGIVNGSYNSPFFITRFREALFHWSALFDMVETNVPRELPERTLIERDLFGREAM 737
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 n++acegaer+er et+++W+ r ++aGF ++pl++++ k+a+  +r  + + + ++e+s++l++gWk+r ++++S W+
  RWR81609.1 738 NIIACEGAERVERPETYKQWKVRTMRAGFLQLPLNQEIIKKARDKVRSSYHKDFVIDENSQWLLQGWKGRIVYALSTWK 816
                 **************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 822 aa     Download sequence    
MREPLWELDV DSQIPVCLSP FLFPSPLEEA LFIESLIPPS APSVSAKKNL DIRRPTKDLD  60
QMVMDPSLVE LAAAMSAGIR FDEFFLDPDG FKEDDPLLFL DQSGLDLPFV PPVPSPNCNS  120
DPAPCLGVNP GENSLEDFEI FSDISLNYIS KMLLEQEDHE AQSSLYQESP ALLYQESSAL  180
QAAEKPLYEI LGGEYPPLVD QLPFHDVESP DDFVNRHGCN YSSGSSSSSS GDGGCVCNGG  240
RYSSSENMLP SSNYTQISSS SNRTGNVMDG LLESPTNTVN TVEVSEFYSE NHPVWQFQKG  300
VEEASKFLPN HVNLITDLDD HVFSPRELKE KPHGVEVTVE KKDQRDHSGS GSRGRKNPHP  360
DDFELEGGRS NKQTAVFHEE TVRSEMFDMV LLCGEEGKCG SALADLQEAL QNEVSKNSQN  420
EQSKGSNGGG RSRGKKQGKR EVVDLRNLLI QCAQAVAAND WRTGSELLKQ IRQHSSPSGD  480
GSQRLAYYFA EGLEARLAGT GSQIYFERAI KRTAADILKA YHLFLAACPF KRVSYFFANQ  540
TILDTVENAT RLHIVDFGIN YGFQWPCLLQ RLGGRSGGPP KVRMTGIDLP QSGFRPAKRV  600
EETGRRLADY AQTFNIRFEY VSIACSKWET IQVEDLKIEK DEVLVVNCSY QFHRLADETV  660
TLESPRDLVL KTIRKMNPDI FIHGIVNGSY NSPFFITRFR EALFHWSALF DMVETNVPRE  720
LPERTLIERD LFGREAMNII ACEGAERVER PETYKQWKVR TMRAGFLQLP LNQEIIKKAR  780
DKVRSSYHKD FVIDENSQWL LQGWKGRIVY ALSTWKPGHA SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein