PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR81601.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family G2-like
Protein Properties Length: 300aa    MW: 33423.3 Da    PI: 5.1244
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR81601.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.44.5e-30140193155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  RWR81601.1 140 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 193
                 59*******************.********************************8 PP
2Myb_DNA-binding48.52e-15142192148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vd+v+ lG +   +ktI++ m+ +g+t++++ s++qky+
       RWR81601.1 142 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 192
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MGRAEDHVME EEEEGEGEEE DENRVMEWED GLPTAADLMP LSQPLIPPEL ASAFSISPEP  60
RRTAIEVSRA SQDTLAVLRS YHHHFNGLGS IPPFDERHQD PTDEIENSAS EMRKGRRSDA  120
DEADSAAAEE DEQSARTLKR PRLVWTPQLH KRFVDVVAHL GIKNAVPKTI MQLMNVEGLT  180
RENVASHLQK YRLYLRRMEG VSDDGGGPSS SDHLFASTPI PQSFHEAGAG QLPAPMMPRP  240
TAQMMPVPVL GMPHGHMGRI QSGGGSSYHG FESHPYNMLR EQQQKYGSIM SYPHMTPSEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59570.11e-65G2-like family protein