PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81327.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 542aa MW: 58977.1 Da PI: 7.8711

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81327.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.8	4e-32	240	297	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+C++++Cpvkkkvers d++v+ei+Y+g H h+k RWR81327.1 240 DDGYNWRKYGQKQVKGSEYPRSYYKCSHPDCPVKKKVERSV-DGQVTEIIYKGAHSHQK 297 8**************************************.*************85 PP
2	WRKY	104.7	4.9e-33	425	483	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gC+v+k+ver++ dp +v++tYeg+Hnh+ RWR81327.1 425 LDDGYRWRKYGQKVVKGNPYPRSYYKCTNSGCNVRKHVERASADPGAVITTYEGKHNHD 483 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MAEKDGAPTK SAPPRPTIDL PPRENFFFRG SNASPGPMTL VSSFFSENDP ESDCRSFSQL 60 LAGAMSPGVR WPKSSDNSAA AAAEAESLRG RDSGDGKREE GFRSNQNRPM SLVMAAQSPG 120 MFTIPSGLSP GCFLDSPGLF SSGQGHFGMI SHQQALAQVT AQAAQSQSHI HTQADYPPSL 180 APTMSVSSSY PTHPAATTMP LQKNPSLTSD AKTATVEALE VSRSDQRSQP PVVTVDKPND 240 DGYNWRKYGQ KQVKGSEYPR SYYKCSHPDC PVKKKVERSV DGQVTEIIYK GAHSHQKPQQ 300 SRRAKEGGLL PSGSAELNER TSLLVNSEIG SQGHTGNFGR SEEIVVASSV SKRDQESGQV 360 ISEQLSGSSD GEEVADAEVR TDAVDDNEPD LKKRCIETRV TESTSHRTVQ EPRIIVQTTS 420 EVDLLDDGYR WRKYGQKVVK GNPYPRSYYK CTNSGCNVRK HVERASADPG AVITTYEGKH 480 NHDVPIAKNS SHNTASNVAA TNSAQLKSQN KMAYEHTSVK GIGYRNDNVR QPVSLVQMKE 540 ER

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MAEKDGAPTK SAPPRPTIDL PPRENFFFRG SNASPGPMTL VSSFFSENDP ESDCRSFSQL  60
LAGAMSPGVR WPKSSDNSAA AAAEAESLRG RDSGDGKREE GFRSNQNRPM SLVMAAQSPG  120
MFTIPSGLSP GCFLDSPGLF SSGQGHFGMI SHQQALAQVT AQAAQSQSHI HTQADYPPSL  180
APTMSVSSSY PTHPAATTMP LQKNPSLTSD AKTATVEALE VSRSDQRSQP PVVTVDKPND  240
DGYNWRKYGQ KQVKGSEYPR SYYKCSHPDC PVKKKVERSV DGQVTEIIYK GAHSHQKPQQ  300
SRRAKEGGLL PSGSAELNER TSLLVNSEIG SQGHTGNFGR SEEIVVASSV SKRDQESGQV  360
ISEQLSGSSD GEEVADAEVR TDAVDDNEPD LKKRCIETRV TESTSHRTVQ EPRIIVQTTS  420
EVDLLDDGYR WRKYGQKVVK GNPYPRSYYK CTNSGCNVRK HVERASADPG AVITTYEGKH  480
NHDVPIAKNS SHNTASNVAA TNSAQLKSQN KMAYEHTSVK GIGYRNDNVR QPVSLVQMKE  540
ER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.1	1e-146	WRKY family protein