PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81192.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 476aa MW: 52445.9 Da PI: 5.435

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81192.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109.3	1.9e-34	266	320	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r+rWtpeLHe+Fveav+qLGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+ RWR81192.1 266 KSRMRWTPELHECFVEAVNQLGGSERATPKGVLKLMNVEGLTIYHVKSHLQKYRT 320 68****************************************************8 PP
2	Myb_DNA-binding	58	2.1e-18	268	319	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + m+ +g+t +++ks++qky+ RWR81192.1 268 RMRWTPELHECFVEAVNQLGGSeraTPKGVLKLMNvEGLTIYHVKSHLQKYR 319 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MIDVAEDTEK GMEVRPASTL HRSDMKHLSN LGVSSVKSSS LPVLPVPVEE TYPSLPDSQQ 60 VSLERELRAD VMAPHTSPVS NSYVVGNLFS SASGFSSDLH FSSSSTQGRH LRNGPFISQS 120 SNREISFPVT HSSHSGLFQS ATSSGYTQEN EDWCTDALQG FLDFSDDVSI PNSAVHTSHG 180 VSFEDHTKQS DWHEWTDQLI TNGNTLDANW NDLNANVTEP ELEKADKPSS NFLVPQPPTH 240 QQMTNNSGEA CPVAGPSSSV IAAPTKSRMR WTPELHECFV EAVNQLGGSE RATPKGVLKL 300 MNVEGLTIYH VKSHLQKYRT ARYRPDSSEG SAEKKISPLE EMSSLDLKNR VDITEALRVQ 360 MEVQKQLHEQ LESQRKLQLR IEEQGRYILM MFEKQNMAGG DKLPSEPNQS PTKAETSEKV 420 HVTVNNDTND AKKAGESSSQ QLADAQKMPE TTTSLDPETT DTSGSHSPAT KRARKS

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MIDVAEDTEK GMEVRPASTL HRSDMKHLSN LGVSSVKSSS LPVLPVPVEE TYPSLPDSQQ  60
VSLERELRAD VMAPHTSPVS NSYVVGNLFS SASGFSSDLH FSSSSTQGRH LRNGPFISQS  120
SNREISFPVT HSSHSGLFQS ATSSGYTQEN EDWCTDALQG FLDFSDDVSI PNSAVHTSHG  180
VSFEDHTKQS DWHEWTDQLI TNGNTLDANW NDLNANVTEP ELEKADKPSS NFLVPQPPTH  240
QQMTNNSGEA CPVAGPSSSV IAAPTKSRMR WTPELHECFV EAVNQLGGSE RATPKGVLKL  300
MNVEGLTIYH VKSHLQKYRT ARYRPDSSEG SAEKKISPLE EMSSLDLKNR VDITEALRVQ  360
MEVQKQLHEQ LESQRKLQLR IEEQGRYILM MFEKQNMAGG DKLPSEPNQS PTKAETSEKV  420
HVTVNNDTND AKKAGESSSQ QLADAQKMPE TTTSLDPETT DTSGSHSPAT KRARKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	2e-88	G2-like family protein