PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR81042.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 339aa MW: 38343 Da PI: 8.5252

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR81042.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.2	3.2e-32	174	227	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ RWR81042.1 174 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 227 9****************************************************7 PP
2	Myb_DNA-binding	48.8	1.6e-15	175	226	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ RWR81042.1 175 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 226 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MDLFPAQPDL SLQISPPNGK PTSTWRRTDE EMELGFLKRA LDPNAIIPPT GKQDTFFELS 60 LTNPKVAETN TTTSHNLFQG HHFPPRYHHL HHNQHQQALH QQQGQHLPQY HHQEFLRPIR 120 GIPVYHSPPS FSFAQQQSCD SLSTTTTKTS LPPQSFMRSR FLPRFPVKRT MRAPRMRWTT 180 TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS HLQMYRTVKS TDRPVPPSGQ 240 PDSFENGASG EISDEVLIDV HKTTANHRTD GCSLWSNSSS REAWLHDISM DSIRNKPSFQ 300 DQIDPKCLSY DGVSDSSASS LTGTGPMKPN LEFTLGRSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	1e-62	G2-like family protein