PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR80998.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ARR-B | ||||||||
Protein Properties | Length: 580aa MW: 64359.6 Da PI: 6.3546 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 88.8 | 5e-28 | 345 | 399 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k++++Wt++LH+rFv+aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR++ RWR80998.1 345 KTKVDWTSDLHRRFVQAVEQL-GIDHAIPSKILELMKVEGLTRHNVASHLQKYRMH 399 6799*****************.********************************96 PP | |||||||
2 | Myb_DNA-binding | 41.1 | 4e-13 | 348 | 397 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT +++ ++v+av+qlG + +++I + m +g+t+ ++ s++qky+ RWR80998.1 348 VDWTSDLHRRFVQAVEQLGIDhaIPSKILELMKvEGLTRHNVASHLQKYR 397 57***********************************************7 PP | |||||||
3 | Response_reg | 30.9 | 1.4e-11 | 20 | 126 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+ d++ l l++ le+ +y +v ++ + eal + +k +++ ++ ++ ++dG ++ ++++ +lp iv++ +++ +++ +Ga RWR80998.1 20 VLLLDEDSLSSADLKSKLEEMDY-IVSTFCNENEALSAISDKAesFHVAIIEVSRGNSDGR--FRFLEAA-RDLPTIVISNIHCLSTMMKCIALGAA 112 7999999999*************.***************666666***************5..4444444.48*******9999************* PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 +fl Kp ++e+l++ RWR80998.1 113 EFLQKPLSEEKLRN 126 ***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 580 aa Download sequence |
MVCSADDLLG RSDFPKGLRV LLLDEDSLSS ADLKSKLEEM DYIVSTFCNE NEALSAISDK 60 AESFHVAIIE VSRGNSDGRF RFLEAARDLP TIVISNIHCL STMMKCIALG AAEFLQKPLS 120 EEKLRNIWQH VIHKMMKISE LNSPEQAFNA GGSGLSKSLK PIKETVASML QLQSETAEVK 180 NENPSDTENS AHADGHDVEQ SLAGDKYPAP STPQLERGRS LDVGDSQDKT SCAVKKESDE 240 HDRESTELRK VSCSESKSVE NTCINSVSAV AVKADSLSSP GVPPLEEEVD SADGSKTSEC 300 NASKESIISS HSHHGDNLES SAGDGYQKKA SAHPNSCVTK TNKKKTKVDW TSDLHRRFVQ 360 AVEQLGIDHA IPSKILELMK VEGLTRHNVA SHLQKYRMHR RHIMPKDDER KWQLQRDPMQ 420 RGYMHKPLMA FPPYHSNCGL PAGQIYPVWG HPSCPTPGMQ MWGHTGYPAW QPQENWLWNT 480 YPGMHADVWG CPVMSPHGPH VIPQPQMQDY SFVEPNMEVS RKSFDLQPAQ EVIDKLVKEV 540 ISQPWLPLPL GLKPPSTDSV LSELHNQGIG AFPPRPHHSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18020.3 | 1e-110 | ARR-B family protein |