PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR80987.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

STAT

Protein Properties

Length: 734aa MW: 82235.1 Da PI: 5.7411

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR80987.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	195.8	4.2e-61	228	350	1	122
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkkypfl 98 +dvvll+ lg+p++k++e+vasL+yad+g++vek d+aeapLL+sy+Gvef+s+drp+kll+GrasfklkisqLsskc+nrLfr++f++p++++ypfl RWR80987.1 228 MDVVLLDGLGRPLQKEMELVASLIYADNGAPVEKLkDNAEAPLLTSYEGVEFPSTDRPIKLLNGRASFKLKISQLSSKCENRLFRVQFRSPHIQSYPFL 326 69******************************97899******************************************************** PP STAT 99 eavskpirCisrsrntrsssltkk 122 ea+s+pirCisr+rn+r+ ++++k RWR80987.1 327 EAYSRPIRCISRNRNSRTPTMMWK 350 *****************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 734 aa Download sequence
MAAEIPFTED CDEYSTLRDL RISLEREEGA FSICLWIYLS NSTRSPATII QQTHSSIEGS 60 IPLLVLNEEM KLTLFPMLFL HKEAPHASNS ASWAYDPPCT SSGTKFPFGK WVHVGCEVAT 120 NCIRLHINGA MVGEKPLSCS SIEDPNHDSV QKITLVGNDG GEQLQGYVHC VQILTPSVSI 180 LDHFHKNPPL ELSLDISSFS ENNDVEESGD GVWSVIGGKA SCRRNFSMDV VLLDGLGRPL 240 QKEMELVASL IYADNGAPVE KLKDNAEAPL LTSYEGVEFP STDRPIKLLN GRASFKLKIS 300 QLSSKCENRL FRVQFRSPHI QSYPFLEAYS RPIRCISRNR NSRTPTMMWK KTATTANQCD 360 GLQLSGLGEG SPRVQYNTSD GRSEILPQSE LKYSPPFKRV KVVHEKSSMR IYANSFPEHL 420 DNGCNSKSLT AKDDGNALTR NSEGRFENLE RAESTPSDLE NVRARNSAFE GMADTRNPIS 480 DLFLFKYCLE GIYERSILLK EVASSASDED IAEFAQQVSL YTGCMHHGEQ ILIAKPLIQE 540 GDDTWNLISR NQHQVLWKGA AQEIEKIFMK ISKSFIRGLS DQDMEVLQRV AGCRDNITRD 600 NFDKMWHWLY PIAFALSRGQ IKELWECTSP KWIEGLITKE EAEASLTAPR GLPKPGNFIL 660 RFPTSRSWPH PDAGSLIVTY IGADYGLHHR LLSLDCSIDE EINKRPLQEL LLAEPELSQL 720 ARVTRQGSQI AGEI

Sequence ? help Back to Top

Protein Sequence Length: 734 aa Download sequence

MAAEIPFTED CDEYSTLRDL RISLEREEGA FSICLWIYLS NSTRSPATII QQTHSSIEGS  60
IPLLVLNEEM KLTLFPMLFL HKEAPHASNS ASWAYDPPCT SSGTKFPFGK WVHVGCEVAT  120
NCIRLHINGA MVGEKPLSCS SIEDPNHDSV QKITLVGNDG GEQLQGYVHC VQILTPSVSI  180
LDHFHKNPPL ELSLDISSFS ENNDVEESGD GVWSVIGGKA SCRRNFSMDV VLLDGLGRPL  240
QKEMELVASL IYADNGAPVE KLKDNAEAPL LTSYEGVEFP STDRPIKLLN GRASFKLKIS  300
QLSSKCENRL FRVQFRSPHI QSYPFLEAYS RPIRCISRNR NSRTPTMMWK KTATTANQCD  360
GLQLSGLGEG SPRVQYNTSD GRSEILPQSE LKYSPPFKRV KVVHEKSSMR IYANSFPEHL  420
DNGCNSKSLT AKDDGNALTR NSEGRFENLE RAESTPSDLE NVRARNSAFE GMADTRNPIS  480
DLFLFKYCLE GIYERSILLK EVASSASDED IAEFAQQVSL YTGCMHHGEQ ILIAKPLIQE  540
GDDTWNLISR NQHQVLWKGA AQEIEKIFMK ISKSFIRGLS DQDMEVLQRV AGCRDNITRD  600
NFDKMWHWLY PIAFALSRGQ IKELWECTSP KWIEGLITKE EAEASLTAPR GLPKPGNFIL  660
RFPTSRSWPH PDAGSLIVTY IGADYGLHHR LLSLDCSIDE EINKRPLQEL LLAEPELSQL  720
ARVTRQGSQI AGEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	0.0	STAT family protein