PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR80865.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 454aa MW: 50917.6 Da PI: 4.7467

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR80865.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	132.5	3.1e-41	31	160	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 +G rF+P+deel+ yL++k +gk e+ e i++vdi+kveP+dLp +k+++ ew+fFs+ ++ky++g rk r+t++gyWk tgkd+++ s RWR80865.1 31 RMGWRFNPKDEELI-AYLREKNAGKLSEI-EEIPDVDICKVEPEDLPVlysgksLIKTDDLEWFFFSPFKRKYQRGCRKDRMTNTGYWKVTGKDRNINS 127 68**********.9*****9999.77***********55777766666778********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyr 127 ++++l+g k+tLvfy gr+p+ e+t+W+ hey+ RWR80865.1 128 RSSKLIGKKRTLVFYAGRTPSYERTNWIAHEYQ 160 ******************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MAISIDGDSD QETGPCSQCG KMAVRTSGPL RMGWRFNPKD EELIAYLREK NAGKLSEIEE 60 IPDVDICKVE PEDLPVLYSG KSLIKTDDLE WFFFSPFKRK YQRGCRKDRM TNTGYWKVTG 120 KDRNINSRSS KLIGKKRTLV FYAGRTPSYE RTNWIAHEYQ TIENGVDGKK CEEGAFVIYR 180 VKKKLDADAT PTINMPFHDD TQMGDAVEQF ETPLNEGILE SSDMPVERSA ADETDGRLYH 240 MVSGEGHCIS RISAGVDGYE AEATEVETQV QSSKNSDQPE CSSPSVYESL SPLNQNMYAG 300 MEHNPKSPLF SDNFQTGQQL VFDDDSSNWD FTRASPQFFW SCCKVVDYKL SRNRLYASTT 360 GSNDTDSQVA ASQGRENGAV ATRVNGGLCS TELEEELEKR LATLQLADKT QAEASHNLEG 420 KQKQIPSMMT VQARREVQGN PWMIYSFTGE GSMS

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MAISIDGDSD QETGPCSQCG KMAVRTSGPL RMGWRFNPKD EELIAYLREK NAGKLSEIEE  60
IPDVDICKVE PEDLPVLYSG KSLIKTDDLE WFFFSPFKRK YQRGCRKDRM TNTGYWKVTG  120
KDRNINSRSS KLIGKKRTLV FYAGRTPSYE RTNWIAHEYQ TIENGVDGKK CEEGAFVIYR  180
VKKKLDADAT PTINMPFHDD TQMGDAVEQF ETPLNEGILE SSDMPVERSA ADETDGRLYH  240
MVSGEGHCIS RISAGVDGYE AEATEVETQV QSSKNSDQPE CSSPSVYESL SPLNQNMYAG  300
MEHNPKSPLF SDNFQTGQQL VFDDDSSNWD FTRASPQFFW SCCKVVDYKL SRNRLYASTT  360
GSNDTDSQVA ASQGRENGAV ATRVNGGLCS TELEEELEKR LATLQLADKT QAEASHNLEG  420
KQKQIPSMMT VQARREVQGN PWMIYSFTGE GSMS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	2e-47	NAC family protein