PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR80830.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 335aa MW: 38376.8 Da PI: 5.7856

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR80830.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.9	9.8e-50	12	139	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek...ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 ppGfrFhPt+eel+++yL+kkv+++k+++ +vi e+d++k+ePw++ +k+k +++ ewyfF ++dkky+tg+r+nrat++g+Wkatg+dk ++s ++ RWR80830.1 12 PPGFRFHPTEEELLHYYLRKKVANEKIDM-DVILEIDLNKLEPWEIVEKCKVGSTpqdEWYFFGHKDKKYPTGNRTNRATTAGFWKATGRDKVICS-SS 108 9**************************.99**********854444333335********************************99.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + +g +ktLvfy grap+gek+dW+mhey+l RWR80830.1 109 KRIGRRKTLVFYMGRAPRGEKSDWIMHEYSL 139 99*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MSLSKSGPAR IPPGFRFHPT EEELLHYYLR KKVANEKIDM DVILEIDLNK LEPWEIVEKC 60 KVGSTPQDEW YFFGHKDKKY PTGNRTNRAT TAGFWKATGR DKVICSSSKR IGRRKTLVFY 120 MGRAPRGEKS DWIMHEYSLV ENTDTDSESN ASYTSAGVTP EEDGWVVCRV FKKKSFLIKT 180 LDNMKESSMA DDDHTQMLHS TRDESLDQIL QYMKRSCLME TDPNNNNNTN YMSCLPALSD 240 EGRVVQSIST QRGDSSSPNQ ANHKEPTLRD WTTVDRLVAS HLNGQSDSFN QLDFFNNSNL 300 SLDQHDLHTD DCNNDFDLWS FPPPPSSIMD PLCHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32770.1	1e-100	NAC family protein