PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80829.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 336aa    MW: 38276.7 Da    PI: 5.2714
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80829.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.43.4e-50121392128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek...ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 ppGfrFhPt+eel+++yL+kkv+++k+++ +vi e+d++k+ePwd+++k+k +++   ewyfF ++dkky+tg+r+nrat++g+Wkatg+dk ++s ++
  RWR80829.1  12 PPGFRFHPTEEELLQYYLRKKVANEKIDM-DVILEIDLNKLEPWDIEEKCKIGSTpqdEWYFFGRKDKKYPTGNRTNRATAAGFWKATGRDKVICS-SS 108
                 9****************************.99**************965554333346************************************99.99 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 +++g +ktLvfy grap+gek+dW+mhey+l
  RWR80829.1 109 SQIGRRKTLVFYMGRAPRGEKSDWIMHEYTL 139
                 99***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MSLSKSGPAR IPPGFRFHPT EEELLQYYLR KKVANEKIDM DVILEIDLNK LEPWDIEEKC  60
KIGSTPQDEW YFFGRKDKKY PTGNRTNRAT AAGFWKATGR DKVICSSSSQ IGRRKTLVFY  120
MGRAPRGEKS DWIMHEYTLV ENTDTDSESN ASYASAGVTP EEDGWVVCRV FKKKSFLIKT  180
LDNMKESSMA DDDHTQMLHS TRDEALDQIL QYMKRSCMME TDPNNNNNTN YMSCLPALSD  240
EGRVVQSIST QRGDSRSPNQ ANHKEPALSD WTSVDRLVAS HLNGQSDSVN QLDFFNNSNL  300
SLDQPDLHTH DCNNDFDLWS FPPPPPSSVM DPLCHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32770.13e-98NAC family protein