PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80828.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 327aa    MW: 37659.8 Da    PI: 6.2365
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80828.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.27.9e-50121392128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek...ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 ppGfrFhPt+eel+++yL+kkv+++k+++ +vi e+d++k+ePwd+++k+k +++   ewyfF ++dkky+tg+r+nrat++g+Wkatg+dk ++s ++
  RWR80828.1  12 PPGFRFHPTEEELLQYYLRKKVANEKIDM-DVILEIDLNKLEPWDIEEKCKIGSTpqdEWYFFGRKDKKYPTGNRTNRATAAGFWKATGRDKVICS-SS 108
                 9****************************.99**************965554333346************************************99.99 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 + +g +ktLvfy grap+gek+dW+mhey+l
  RWR80828.1 109 SPIGRRKTLVFYMGRAPRGEKSDWIMHEYTL 139
                 9****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MSLSKSGPAR IPPGFRFHPT EEELLQYYLR KKVANEKIDM DVILEIDLNK LEPWDIEEKC  60
KIGSTPQDEW YFFGRKDKKY PTGNRTNRAT AAGFWKATGR DKVICSSSSP IGRRKTLVFY  120
MGRAPRGEKS DWIMHEYTLV ENTDTDSGSN ASYTSAGVTP EEDGWVVCRV FKKKSFLIKT  180
LDNMKESSMA DDDHTQMLHS TRDGVLDQIL QYMKRSYMME TDPNNNNNTD YMTCLPALSD  240
QGRVVQSIST QRGDSSSTNQ ANHKEPALSD WTTFDRLVAS HLNDQSDSFN QLDFFNNSNL  300
SLDQQDLHTD DCNNHFDLWS FHHHHRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32770.18e-97NAC family protein