PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR80827.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 346aa MW: 39756.5 Da PI: 6.291

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR80827.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.7	2.8e-50	24	151	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 ppGfrFhPt+eel+++yL+kkv+++k+++ +vi +d++k+ePwd+++ k+ + +++ewyfF ++dkky+tg+r+nrat++g+Wkatg+dk ++s ++ RWR80827.1 24 PPGFRFHPTEEELLQYYLRKKVANEKIDM-DVILAIDLNKLEPWDIEEkcKIGStHQDEWYFFGHKDKKYPTGNRTNRATAAGFWKATGRDKVICS-SS 120 9**************************.99**********952433333555********************************99.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + +g +ktLvfy grap+gek+dW+mheyrl RWR80827.1 121 KRIGRRKTLVFYMGRAPRGEKSDWIMHEYRL 151 99*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MIDCVHPKAE EKMSLSKSGP ARIPPGFRFH PTEEELLQYY LRKKVANEKI DMDVILAIDL 60 NKLEPWDIEE KCKIGSTHQD EWYFFGHKDK KYPTGNRTNR ATAAGFWKAT GRDKVICSSS 120 KRIGRRKTLV FYMGRAPRGE KSDWIMHEYR LMENTDTNSE SNASYTSAGV TPEEDGWVVC 180 RVFKKKSFLK TLDNMKESSM ADDDHTQMLH SSRDGALDQI LQYMKRSCMM ETEPNNNNNT 240 NYMTCLPALS DEGRVFQSIS RQRGDSSSPN QANHKEPTLR DWTTVDRLVA SHLNGQSDSF 300 NQLDFFNNSN LSIDQQDLHT DDCNNDFDLW SFPPPPSSIM DPLCHL

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MIDCVHPKAE EKMSLSKSGP ARIPPGFRFH PTEEELLQYY LRKKVANEKI DMDVILAIDL  60
NKLEPWDIEE KCKIGSTHQD EWYFFGHKDK KYPTGNRTNR ATAAGFWKAT GRDKVICSSS  120
KRIGRRKTLV FYMGRAPRGE KSDWIMHEYR LMENTDTNSE SNASYTSAGV TPEEDGWVVC  180
RVFKKKSFLK TLDNMKESSM ADDDHTQMLH SSRDGALDQI LQYMKRSCMM ETEPNNNNNT  240
NYMTCLPALS DEGRVFQSIS RQRGDSSSPN QANHKEPTLR DWTTVDRLVA SHLNGQSDSF  300
NQLDFFNNSN LSIDQQDLHT DDCNNDFDLW SFPPPPSSIM DPLCHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32770.1	1e-101	NAC family protein