PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR80670.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 369aa MW: 42701.7 Da PI: 6.507

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR80670.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.9	3.2e-56	23	152	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv++yL+kkv++++++l +vik++d+yk+ePwdL++ k+ + e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++s k RWR80670.1 23 VPPGFRFHPTDEELVDYYLRKKVASRRIDL-DVIKDIDLYKIEPWDLQEkcKIGTeEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYS-K 119 69**************************.9***********952444443555**********************************.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 ++l+g++ktLvfykgrap+g+k+dW+mheyrle RWR80670.1 120 HNLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 152 99***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MVCFTYYAGV DFYTENMNTF SHVPPGFRFH PTDEELVDYY LRKKVASRRI DLDVIKDIDL 60 YKIEPWDLQE KCKIGTEEQN EWYFFSHKDK KYPTGTRTNR ATTAGFWKAT GRDKAIYSKH 120 NLIGMRKTLV FYKGRAPNGQ KSDWIMHEYR LETNENGPPQ EEGWVVCRVF KKRITAIQKA 180 NEHEAACWYE DQVSFMPDLD SPKRIVPNMG YHLPYSCKPE LELHYHIPHD PFLQLPQLES 240 PKLPNSSGTV SCNSIAPYGL DINHGSSLLS SSFAQEEHMQ QSHQHQMNSA YHNAEHSMDQ 300 VTDWRVLDKF VASQLSQEDS PKEPDYSNAT NLFHVSDHVN LLARQSNKPD SAAEYASTST 360 SSCQIDLWK

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MVCFTYYAGV DFYTENMNTF SHVPPGFRFH PTDEELVDYY LRKKVASRRI DLDVIKDIDL  60
YKIEPWDLQE KCKIGTEEQN EWYFFSHKDK KYPTGTRTNR ATTAGFWKAT GRDKAIYSKH  120
NLIGMRKTLV FYKGRAPNGQ KSDWIMHEYR LETNENGPPQ EEGWVVCRVF KKRITAIQKA  180
NEHEAACWYE DQVSFMPDLD SPKRIVPNMG YHLPYSCKPE LELHYHIPHD PFLQLPQLES  240
PKLPNSSGTV SCNSIAPYGL DINHGSSLLS SSFAQEEHMQ QSHQHQMNSA YHNAEHSMDQ  300
VTDWRVLDKF VASQLSQEDS PKEPDYSNAT NLFHVSDHVN LLARQSNKPD SAAEYASTST  360
SSCQIDLWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-132	NAC family protein