PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR80637.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 251aa MW: 27403.1 Da PI: 6.1687 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59 | 1.2e-18 | 84 | 132 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a++ ++g RWR80637.1 84 YRGVRRRN-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALTIKG 132 9****877.**********843...6**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MEEANTIEDE ANYSSSSPST TTTSSSKPLG LHAVSGSGPN SKISKEPPER SSTNNNKVIE 60 TNGSESKKQQ ERNSNSNGGK HPMYRGVRRR NWGKWVSEIR EPRKKSRIWL GTFPTPEMAA 120 RAHDVAALTI KGRAAYLNFP ELAQQLPRPA TTSPKDIRAA AAKAAATAFD EPSREGGPGQ 180 SHCAIDTSLS TDSSASPLTE DDYDSLFDLP DLIDDVAYFN SPTHHFFSPS PLLPAASDFG 240 FRHEDPFLWE P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 1e-48 | ERF family protein |