PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR80595.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 381aa MW: 43223.5 Da PI: 5.0635

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR80595.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.2	6.6e-53	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtd el+ +yLk+k++g ++el evi+ +d+yk++Pw+Lp k + +++ ewyfF++rd+ky++g+r+nrat++gyWkatgkd+++++ ++ RWR80595.1 6 LPPGFRFHPTDGELIGYYLKRKIDGLEIEL-EVIPAIDLYKFDPWELPdKsFLPKRDMEWYFFCPRDRKYPNGSRTNRATAAGYWKATGKDRKIVC-DS 102 79**************************.99**********96434556788**********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++gl+ktLvfy grap+g +tdWvmheyrl RWR80595.1 103 AVTGLRKTLVFYCGRAPSGDRTDWVMHEYRL 133 9**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MGGASLPPGF RFHPTDGELI GYYLKRKIDG LEIELEVIPA IDLYKFDPWE LPDKSFLPKR 60 DMEWYFFCPR DRKYPNGSRT NRATAAGYWK ATGKDRKIVC DSAVTGLRKT LVFYCGRAPS 120 GDRTDWVMHE YRLCGDSSQG SCSFEGSFSL CRIVKKTEQG LKIGEFHGEF TAKTIVSSMK 180 NRCTPRMFKR KALRTSEESS SQASYPFDDS NDSTPITSPS KIHSTMESEP NLTQFDYTSH 240 WMTHEMVSNA SKVFAQAWDN GSECILPNEF QNSEWQPCNP IVSPIPSYFM EEVHPIDDQG 300 QIRCISPYPK PMTDNGMFSN ENTEVQSLKW AESPGDINHM TDGFEDWNST TSPPICRQVS 360 GDGSFVELNS LWLIEDNIVT I

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MGGASLPPGF RFHPTDGELI GYYLKRKIDG LEIELEVIPA IDLYKFDPWE LPDKSFLPKR  60
DMEWYFFCPR DRKYPNGSRT NRATAAGYWK ATGKDRKIVC DSAVTGLRKT LVFYCGRAPS  120
GDRTDWVMHE YRLCGDSSQG SCSFEGSFSL CRIVKKTEQG LKIGEFHGEF TAKTIVSSMK  180
NRCTPRMFKR KALRTSEESS SQASYPFDDS NDSTPITSPS KIHSTMESEP NLTQFDYTSH  240
WMTHEMVSNA SKVFAQAWDN GSECILPNEF QNSEWQPCNP IVSPIPSYFM EEVHPIDDQG  300
QIRCISPYPK PMTDNGMFSN ENTEVQSLKW AESPGDINHM TDGFEDWNST TSPPICRQVS  360
GDGSFVELNS LWLIEDNIVT I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	3e-88	NAC family protein