PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80323.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YA
Protein Properties Length: 324aa    MW: 35236.4 Da    PI: 8.8227
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80323.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.39.4e-32156212158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 d p+YVNaKQy++Il+RRq+Rak+e e+k  +k+rkpy+heSRh hAlrR+Rg+gGrF
  RWR80323.1 156 DGPIYVNAKQYHGILRRRQSRAKAELENKA-IKARKPYMHESRHLHALRRARGCGGRF 212
                 57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MQTVCFKDHG GTLQNPVTQA SAVPVVPWWG VAGSQPVVYH EQFGQLKSLS IDHPNGGQLS  60
GAPGQVHQGT NQGPSVAICV DEKYDQNKES VKGQKPLQLS TTISLHPERQ AHSEMGLGQT  120
MVCTNYPYMD QCYGLFSTYG AQATGRMLLP LNFTDDGPIY VNAKQYHGIL RRRQSRAKAE  180
LENKAIKARK PYMHESRHLH ALRRARGCGG RFLNTKSTNS RKEGSDSDKA SDGRVPQADG  240
SPSSEVLQSD SGNVNSAKEP CGSSSLSGSE VTSMYSQGDL GRFQIKNPHS SAFHAHSNMM  300
DNGPNINMAT KWVAADGRCD FLKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05690.12e-43NF-YA family protein