PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR80088.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

DBB

Protein Properties

Length: 383aa MW: 42144.4 Da PI: 7.9364

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR80088.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.9	6.5e-06	23	54	5	36
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg 36 C+ +++ + lfC+ ++ lC +C H RWR80088.1 23 PCEFCSDSVAVLFCRADSAKLCLSCDRVVHAA 54 6****99***************999954 PP
2	zf-B_box	24.6	5.4e-08	64	108	3	41
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 ++C+++ +++ C +++ llC+dC H g H+++p RWR80088.1 64 SQICDNCRGQPVAVRCATDGLLLCQDCDWDAHGGcsaaasHDRSP 108 689*************************99996588899998877 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MEKTTSSPPP VVTRRTGTES FFPCEFCSDS VAVLFCRADS AKLCLSCDRV VHAANALSRK 60 HVRSQICDNC RGQPVAVRCA TDGLLLCQDC DWDAHGGCSA AASHDRSPVD GFSGCPAALN 120 LASIWGLDLS DKKLGEGFDS VFSNWDSLDS ILPVDDSWVK DLGEEVPSPP QPQPPRKAEN 180 SSGGKRKQVI LQQLVEMLKR DLVQGQQKGS NCEWRPATPE RNSASDLGDG SDMRQQQRQA 240 SLTAMLTLPV RRMDLAEGDR VAQEDMIWST CNAAVDQSSQ LGVMHSISKW QNNSKTPVNQ 300 RPTPSGKRVL TSRSSIATLS EPRDKGNSKD FNFGEQPPPM DIGDAIRATT RTEMELLAQN 360 RGNAMQRYKE KRKNRRHIKA LVF

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MEKTTSSPPP VVTRRTGTES FFPCEFCSDS VAVLFCRADS AKLCLSCDRV VHAANALSRK  60
HVRSQICDNC RGQPVAVRCA TDGLLLCQDC DWDAHGGCSA AASHDRSPVD GFSGCPAALN  120
LASIWGLDLS DKKLGEGFDS VFSNWDSLDS ILPVDDSWVK DLGEEVPSPP QPQPPRKAEN  180
SSGGKRKQVI LQQLVEMLKR DLVQGQQKGS NCEWRPATPE RNSASDLGDG SDMRQQQRQA  240
SLTAMLTLPV RRMDLAEGDR VAQEDMIWST CNAAVDQSSQ LGVMHSISKW QNNSKTPVNQ  300
RPTPSGKRVL TSRSSIATLS EPRDKGNSKD FNFGEQPPPM DIGDAIRATT RTEMELLAQN  360
RGNAMQRYKE KRKNRRHIKA LVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33500.2	1e-69	CO-like family protein