PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR80034.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 252aa MW: 28393.6 Da PI: 4.8688 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 141 | 7.3e-44 | 4 | 136 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 lppGfrF Pt++elv +yL++k+egk+ le+vi+ vdiy+++Pw+Lp+ ++++++++w+fFs+r++++a+g r+nr+t sgyWkatg+ +++s+ RWR80034.1 4 LPPGFRFFPTEDELVGFYLRHKLEGKREGLERVIPVVDIYSLDPWELPRisgELSTGDEQWFFFSPRQEREARGGRPNRITPSGYWKATGTPSNIFSSt 102 79*************************999999**************955667778999**************************************85 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyr 127 + ++glk+t+vfy+g+ap+g+kt+W ++ey+ RWR80034.1 103 stANFKIGLKRTMVFYEGKAPTGNKTKWKVNEYK 136 444445***************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MSSLPPGFRF FPTEDELVGF YLRHKLEGKR EGLERVIPVV DIYSLDPWEL PRISGELSTG 60 DEQWFFFSPR QEREARGGRP NRITPSGYWK ATGTPSNIFS STSTANFKIG LKRTMVFYEG 120 KAPTGNKTKW KVNEYKALEE ARTSSDAPKV RHEMSLCRVY VTSGTLRSFD RRPLVSGRGE 180 VVVREESSGA ITDGGFYNNE GTSSSCFAEV SQESTSMEEQ GSRMNPSLAE DAETELNTMD 240 DLEALWSSFC WD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 4e-72 | NAC family protein |