PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR80027.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family CAMTA
Protein Properties Length: 1103aa    MW: 122405 Da    PI: 6.0846
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR80027.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1168.79e-53141283116
        CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100
                 +e ++rwlk+ e+  +L+n++kh+l l+++++p+sgsl+L+nr+++r+frkDG sw+kkkdgk+v E+he+LKvg v++++cyYah+e+np+fqrrcyw
  RWR80027.1  14 QEaQSRWLKPAEVFFVLQNYDKHHLNLKPPENPQSGSLFLFNRRVLRFFRKDGVSWRKKKDGKSVGEAHERLKVGDVDAVNCYYAHGEQNPNFQRRCYW 112
                 5669*********************************************************************************************** PP

        CG-1 101 lLeeelekivlvhyle 116
                 +L+ + ++ivlvhy+e
  RWR80027.1 113 ILDPTCDHIVLVHYRE 128
                 **************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1103 aa     Download sequence    
MMMQNGYDIN KLFQEAQSRW LKPAEVFFVL QNYDKHHLNL KPPENPQSGS LFLFNRRVLR  60
FFRKDGVSWR KKKDGKSVGE AHERLKVGDV DAVNCYYAHG EQNPNFQRRC YWILDPTCDH  120
IVLVHYREIT DRKTYNGSTS DLLPDSFSIF SQSSGYCNVH PGSSSGISES HESYQSAFSP  180
GSVEEVSSPF VGRNNNMDRV DVDGPGEFGG SSYPEVNQAL RRLTVQLSLD DDDGLMYLEK  240
LPPDYSQIEN PQDSELLVYG SEESKHDALI GLPLGEHDQW SVGNNGVQAN LKELLLQNSG  300
DTEKQDGQPF DPGCKTDRKE PNSWKEMLEM SSISTGINSQ NKPLDILPLN GVSHPPQNEI  360
FKYEAGYHSK DATSLETGSL FLSDRGNVST DLSMQPEKLI FQWQDFKGMN EANQSNCHRN  420
SESDFSLQLS ATRQFLLGSD DAIISPSSSE LTQKDEKSVH SSIHSSATPT IGTDSGIGML  480
GRTDSIAWME TGNIPIVKHT PDCYEVWFNQ KNSIATPVEA DSSLTIPREQ HFSIREISPG  540
WAYSTESTKV CALIITGDFL CDHLEHVWGC MFGDIEVPAE VIQAGVLRCQ APQHKAGKVT  600
FCITSGNKEP CSEVREFEYR MQLKSSTLDD DLPEKDAYKS TEELLLLAKF AKNLLVGHDS  660
SSVARVDYVE SGVGNLRKSR IADDPWGQII ESLLIGSENP STIMDSILQE LLKDKLQQWL  720
SSRCRGGEVT DNSLSKEERG IIHMIAGLGY EWALNSILNV GVGINFRDLN GWTALHWAAR  780
FGREKMVAAL LAAGASAGAV TDPTSQDPVG KSPASIAAAC GHKGLAGYLS EVALTSHLSS  840
LTLKESKISE GSASVEAERT VESISDKSIQ IPADAIEDQL SLIDSLAAVR NAAQAAARIQ  900
SAFHAYSFRR RQQRAAASCD EHGLTADDIH GLSAASKLLG LRDHKLNTAA LSIQKKYRGW  960
KGRKEFLALR QNVVKIQAHV RGHQVRRKYK FLWTVGVLEK VVLRWRRKGV GLRGFRAEPL  1020
PIDQSEDDDI LKVFRKQKVD VAVDEAVSRV LSIVDSPKAR QQYRRILEGY RQAKAQISSN  1080
NGKALSSQGN DMESDVDDMH HFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.11e-168CAMTA family protein