PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR79654.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 401aa MW: 44560.9 Da PI: 6.6754

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR79654.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.6	1.4e-33	43	97	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLHerF+eav+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl RWR79654.1 43 KPRLKWTPELHERFIEAVNQLGGADKATPKTVMRLMGIPGLTLYHLKSHLQKYRL 97 79****************************************************8 PP
2	Myb_DNA-binding	68.2	1.4e-21	45	96	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++e++++av+qlGg t+kt++r mg g+tl+++ks++qky+ RWR79654.1 45 RLKWTPELHERFIEAVNQLGGAdkaTPKTVMRLMGiPGLTLYHLKSHLQKYR 96 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MYQHQGKNHF PSFRTSIPPE SHLFLQGANG VGDAGLVLST DAKPRLKWTP ELHERFIEAV 60 NQLGGADKAT PKTVMRLMGI PGLTLYHLKS HLQKYRLSKN IQGQANIGNN KNGCMASADR 120 MSEGSGALMS NTNHGSQISK SLQISEALQM QIEVQRKLHE QLEVQRHLQL RIEAQGKYLQ 180 SVLEKAQETL GRQNLGSAGL EAAKVQLSEL VSRVSNECLN SAFSELKDIS GLCSQQSQTK 240 QIADCSVDSC LTCEGSQKDQ EMHNVDMGLI NYNSDAPFRT KETGEDSRPG GAEFAWCEDL 300 NESKMFALQR IMLPIERNSS DLSMRTGVRG EKESSNTFSK TRRERRDAME TELSAIQQEN 360 KKPSEGLGLT YLTGQLDLNA YDENDAASSR KQFDLNGFSW N

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MYQHQGKNHF PSFRTSIPPE SHLFLQGANG VGDAGLVLST DAKPRLKWTP ELHERFIEAV  60
NQLGGADKAT PKTVMRLMGI PGLTLYHLKS HLQKYRLSKN IQGQANIGNN KNGCMASADR  120
MSEGSGALMS NTNHGSQISK SLQISEALQM QIEVQRKLHE QLEVQRHLQL RIEAQGKYLQ  180
SVLEKAQETL GRQNLGSAGL EAAKVQLSEL VSRVSNECLN SAFSELKDIS GLCSQQSQTK  240
QIADCSVDSC LTCEGSQKDQ EMHNVDMGLI NYNSDAPFRT KETGEDSRPG GAEFAWCEDL  300
NESKMFALQR IMLPIERNSS DLSMRTGVRG EKESSNTFSK TRRERRDAME TELSAIQQEN  360
KKPSEGLGLT YLTGQLDLNA YDENDAASSR KQFDLNGFSW N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-136	G2-like family protein