PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR79636.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family SRS
Protein Properties Length: 323aa    MW: 34964.9 Da    PI: 8.5816
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR79636.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702191.62.8e-59872453154
      DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkele 101
                  g+++C+dCGnqakkdC+h+RCRtCC+s+gf+C+thv+stW+p+a+rrerq            s +++++k+ r    +++   s+ + s+++++++++
  RWR79636.1  87 IGQITCKDCGNQAKKDCSHRRCRTCCRSHGFSCSTHVRSTWIPVARRRERQISGGGG---GGLSVSTSTAKKARVIAFESNGMFSHISNSNTTPPRSSD 182
                 5889**********************************************8776543...333344455555555555555555555555555555555 PP

      DUF702 102 tss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                 tss          lP +v+++avf+cvrv+++d+ge+e+ Yq++v+i Ghvf+G+LydqG+e+
  RWR79636.1 183 TSSsqqdasfkesLPGHVQAPAVFKCVRVTAMDNGEDEYVYQAVVKIRGHVFRGVLYDQGIER 245
                 5555555555556***********************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MVGLIFPHLQ YQQPDHIFSD HPINNITNTH NPNNNNNTPA LGVGVLSTAN TVQESGSRET  60
HLWQSHLNFL KKPVSDVFNT SNPSSGIGQI TCKDCGNQAK KDCSHRRCRT CCRSHGFSCS  120
THVRSTWIPV ARRRERQISG GGGGGLSVST STAKKARVIA FESNGMFSHI SNSNTTPPRS  180
SDTSSSQQDA SFKESLPGHV QAPAVFKCVR VTAMDNGEDE YVYQAVVKIR GHVFRGVLYD  240
QGIERRDGVS DISDLHLGGP GARNNGASSS PLLDHPDIYA ATGNGSVAAI AYDITLTKRA  300
ARPVLASLRE DAERLDQTIE TVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.15e-48SRS family protein