PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR79466.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 210aa MW: 22501 Da PI: 5.0512 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.2 | 3.5e-17 | 25 | 74 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr +k +g+Wv+eIr p++ r+r++lg+++ +e+Aa+a + a+ +l+g RWR79466.1 25 RYRGVRKRK-WGKWVSEIRLPNS---RQRIWLGSYDAPEKAARAFDTAAFCLRG 74 59****999.**********933...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MVKPTAPRTS TSSSSSSSSW DREIRYRGVR KRKWGKWVSE IRLPNSRQRI WLGSYDAPEK 60 AARAFDTAAF CLRGRNAKLN FPENLPDIAG GRSLTPSEIQ AFASHFANEA LPPSEKESTI 120 ASSAPSGSES GVPLECDLNV DWLFLDPSSS AAAAAAAAAA GSGFGYFPAF GEFPGDGEIY 180 APPPTPLEVD NVGENNGGCC FSQVCNLWNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 9e-44 | ERF family protein |