PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR79197.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 340aa MW: 38753.3 Da PI: 4.8665 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 177.5 | 3.7e-55 | 8 | 137 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL++ ++ e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v++ k RWR79197.1 8 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLQEqcRIGYeEQSEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYD-K 104 69****************************.9***************953433332566**************************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 ++l+g++ktLvfykgrap+g+k+dW+mheyrle RWR79197.1 105 TRLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 137 99*****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 340 aa Download sequence |
METMESCVPP GFRFHPTDEE LVGYYLRKKV ASQKIDLDVI RDIDLYRIEP WDLQEQCRIG 60 YEEQSEWYFF SHKDKKYPTG TRTNRATMAG FWKATGRDKA VYDKTRLIGM RKTLVFYKGR 120 APNGQKSDWI MHEYRLESEE NGPPQEEGWV VCRAFKKRST NCQARNCEGW ESSYGYDEPG 180 GGLSSIIDSI DYLPRQAPTF LCKQEIESDN LNYLHSEQFV QQLPQLNSPS LTLKKRPSIV 240 SIGSPNDDED EEVKSMMRGC NNAEKVTDWR ALDKFVASQL SHGERGDDGE RVGELGGQEN 300 SDMALLLLQS SGSSREEGSK INELLSSGSV CDIGICVFEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18060.1 | 1e-154 | NAC family protein |