PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR79156.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

SRS

Protein Properties

Length: 321aa MW: 33654.1 Da PI: 7.9871

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR79156.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	219.6	6.6e-68	96	249	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrelkskkqsa...lsstklssaesk 97 g++sCqdCGnqakkdC+h+RCRtCCksrgf+C th+kstWvpa++rrerq+qlaaa++ + +++ ++ ++kr+re+ +++++a l++t+l+s++ RWR79156.1 96 GGSMSCQDCGNQAKKDCSHMRCRTCCKSRGFQCPTHIKSTWVPASRRRERQHQLAAAAAAQHEQQqQHLNPKRHRETAAAAAAAagpLACTRLPSSSG- 193 5789*********************************************99998877666555366788899988555444411145566555532. PP DUF702 98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 + + ++P+e+ seavfrcvrvs++dd +e++aYqtavsi+GhvfkGiLyd+G+++ RWR79156.1 194 -MEVAGNFPAELTSEAVFRCVRVSGIDDPDEQYAYQTAVSISGHVFKGILYDHGPDS 249 .334456**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MAGFSLGGGG GGNQDQQGIP PESFFLYNTT TTRGEEYTRG FELWQQQQQH QHQQQQRNLF 60 YSGGVGVGLG SDEGAGGAVG SGGSSSSRTV MMTRQGGSMS CQDCGNQAKK DCSHMRCRTC 120 CKSRGFQCPT HIKSTWVPAS RRRERQHQLA AAAAAQHEQQ QQHLNPKRHR ETAAAAAAAA 180 GPLACTRLPS SSGMEVAGNF PAELTSEAVF RCVRVSGIDD PDEQYAYQTA VSISGHVFKG 240 ILYDHGPDSS HYSAGEASTS PAVISGRMGS NPPPITAGPS GGSSAGASAA AAAALLDPSS 300 LYPTPLNAFM AGTQFFPHPR S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	4e-64	SRS family protein