PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR78926.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 361aa MW: 40986.2 Da PI: 5.7992

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR78926.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103	1.9e-32	66	119	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+++AtPk +l+lm+vkgL+++hvkSHLQ+YR+ RWR78926.1 66 PRLRWTPDLHLCFVHAVERLGGQDRATPKLVLQLMNVKGLSIAHVKSHLQMYRS 119 8****************************************************7 PP
2	Myb_DNA-binding	51.4	2.5e-16	67	118	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ + m+ kg++ ++ks++q+y+ RWR78926.1 67 RLRWTPDLHLCFVHAVERLGGQdraTPKLVLQLMNvKGLSIAHVKSHLQMYR 118 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MKGSESSEGS KKNPSDKDEE DDDEEEEEEE EEKPRNGGSS SNSTVEENEK KAGSGSVRQY 60 VRSKMPRLRW TPDLHLCFVH AVERLGGQDR ATPKLVLQLM NVKGLSIAHV KSHLQMYRSK 120 KIDDSGQVIT DQGNVMEDGG RHIYSLSQLP MLQGYNNQRP INTIRYDGAS WSSNGNWMHN 180 PFRGGITTPN WDRHMDKSIL VDQSGRKMFY NNQFYQFHIG PNPTEHTYVT QLNTRTRAQA 240 SCSNNTHTPQ TDWQGKSPER DQEERWQAKR KAIDCELDLS LSLNVTSRCE EHPMAWEDRE 300 EKEEEDNTLS LALLRPSKKG KRPKVDGNAS DLGRLKGEED SKEHAGTPST LDLTMSVGPL 360 E

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MKGSESSEGS KKNPSDKDEE DDDEEEEEEE EEKPRNGGSS SNSTVEENEK KAGSGSVRQY  60
VRSKMPRLRW TPDLHLCFVH AVERLGGQDR ATPKLVLQLM NVKGLSIAHV KSHLQMYRSK  120
KIDDSGQVIT DQGNVMEDGG RHIYSLSQLP MLQGYNNQRP INTIRYDGAS WSSNGNWMHN  180
PFRGGITTPN WDRHMDKSIL VDQSGRKMFY NNQFYQFHIG PNPTEHTYVT QLNTRTRAQA  240
SCSNNTHTPQ TDWQGKSPER DQEERWQAKR KAIDCELDLS LSLNVTSRCE EHPMAWEDRE  300
EKEEEDNTLS LALLRPSKKG KRPKVDGNAS DLGRLKGEED SKEHAGTPST LDLTMSVGPL  360
E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-52	G2-like family protein