PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR78903.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family LBD
Protein Properties Length: 163aa    MW: 18116.5 Da    PI: 8.1165
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR78903.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260131.53.5e-4110107198
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +CaaCk+l+r+C++dC++apyf +++p+kfanvhk+FGasnv+k+l+++p e r+da++sl+yeAear+rdPv G+vg i+ lq+++ ql+++la ++
  RWR78903.1  10 PCAACKFLKRRCTPDCTFAPYFRSDEPQKFANVHKVFGASNVTKILNEVPLELRRDAVDSLAYEAEARLRDPVFGCVGDISLLQWKMVQLQEDLANAR 107
                 7*********************************************************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MKGTRSSSSP CAACKFLKRR CTPDCTFAPY FRSDEPQKFA NVHKVFGASN VTKILNEVPL  60
ELRRDAVDSL AYEAEARLRD PVFGCVGDIS LLQWKMVQLQ EDLANARVRL ARYVNAPSSS  120
SQSMTSTSSC DRFFHDWTAF ATQLDMPVTN ELGSSSTSMN NVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66870.11e-50LBD family protein