PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR78811.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 580aa MW: 62740 Da PI: 6.0513

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR78811.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.7	1.5e-30	239	298	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+a+d +++++tYeg+Hnh+ RWR78811.1 239 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCADDMSILITTYEGNHNHP 298 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 580 aa Download sequence
MEVVETKRSV KDEKRVECNG AEDEGEEAGK IGSMKPVQEN NNSKPSSPSQ RDSSIIKQDD 60 KIESAKAEMG EVREENERLK TTLARIVKEY QSLQLQFYSI VQQEQAKKSS ETTTTSTDQE 120 IEESELVSLS LGTTTSGQKK EEKIVGSSSK SKEEEQLKEG LTLGLDCKFE ASTSGAYETP 180 SNPSPENSFE EPKEEEVGEG WPPSKILKTL RSGDDEVSQQ TSVKKARVSV RARCDTPTMN 240 DGCQWRKYGQ KIAKGNPCPR AYYRCTVAPG CPVRKQVQRC ADDMSILITT YEGNHNHPLP 300 VSATAMASTT AAAASMLMSG SSTSQQTFGG FGTTSANLHG LNFSISDNSR SRQFYLPNPS 360 ISPSPSYPTI TLDLTSPPTS SSQPSQFNRF SSSFSSAPRY YSSTSFNFSS SDSSTVPTSW 420 GNGYLSYGSQ AYKPNQIGPL NLGKQSQEQF YQSYLQKNNP VPPQQALTDS IAAATKAITS 480 DPSFRSALAA AITSIVGNGG VHGNQGGVEN VGQNLKWVEP IQAIPPYSSS SNGNCAPSYL 540 NRSSSSNHQQ GNLIFLSSSL PFSSKSASAP SSVDNREHIN

Sequence ? help Back to Top

Protein Sequence Length: 580 aa Download sequence

MEVVETKRSV KDEKRVECNG AEDEGEEAGK IGSMKPVQEN NNSKPSSPSQ RDSSIIKQDD  60
KIESAKAEMG EVREENERLK TTLARIVKEY QSLQLQFYSI VQQEQAKKSS ETTTTSTDQE  120
IEESELVSLS LGTTTSGQKK EEKIVGSSSK SKEEEQLKEG LTLGLDCKFE ASTSGAYETP  180
SNPSPENSFE EPKEEEVGEG WPPSKILKTL RSGDDEVSQQ TSVKKARVSV RARCDTPTMN  240
DGCQWRKYGQ KIAKGNPCPR AYYRCTVAPG CPVRKQVQRC ADDMSILITT YEGNHNHPLP  300
VSATAMASTT AAAASMLMSG SSTSQQTFGG FGTTSANLHG LNFSISDNSR SRQFYLPNPS  360
ISPSPSYPTI TLDLTSPPTS SSQPSQFNRF SSSFSSAPRY YSSTSFNFSS SDSSTVPTSW  420
GNGYLSYGSQ AYKPNQIGPL NLGKQSQEQF YQSYLQKNNP VPPQQALTDS IAAATKAITS  480
DPSFRSALAA AITSIVGNGG VHGNQGGVEN VGQNLKWVEP IQAIPPYSSS SNGNCAPSYL  540
NRSSSSNHQQ GNLIFLSSSL PFSSKSASAP SSVDNREHIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	4e-51	WRKY family protein